Gunsalus and Piano Lab

Publications

Papers

View publications on PubMed.

2024

  1. Guerin MN, Ellis TS, Ware MJ, Manning A, Coley AA, Amini A, Igboanugo AG, Rothrock AP, Chung G, Gunsalus KC, Bracht JR. Evolution of a biological thermocouple by adaptation of cytochrome c oxidase in a subterrestrial metazoan, Halicephalobus mephisto. Commun Biol 2024; doi: 10.1038/s42003-024-06886-z.
 
  1. Bevilacqua A, Franco F, Lu YT, Rahiman N, Kao KC, Chuang YM, Zhu Y, Held W, Xie X, Gunsalus KC, Xiao Z, Chen SY, Ho PC. PPARβ/δ-orchestrated metabolic reprogramming supports the formation and maintenance of memory CD8+ T cells. Sci Immunol 2024; doi: 10.1126/sciimmunol.adn2717.
 
  1. Vallès Y, Arshad M, Abdalbaqi M, Inman CK, Ahmad A, Drou N, Gunsalus KC, Ali R, Tahlak M, Abdulle A. The infants’ gut microbiome: setting the stage for the early onset of obesity. Front Microbiol 2024; doi: 10.3389/fmicb.2024.1371292.
 
  1. Esposito G, Hunashal Y, Percipalle M, Fogolari F, Venit T, Leonchiks A, Gunsalus KC, Piano F, Percipalle P. Assessing nanobody interaction with SARS-CoV-2 Nsp9. PLoS One 2024; doi: 10.1371/journal.pone.0303839.

2023

  1. Guerin MN, Ellis T, Ware MJ, Manning A, Coley A, Amini A, Chung G, Gunsalus KC, Bracht JR. Evolution of a biological thermocouple by adaptation of cytochrome c oxidase in a subterrestrial metazoan. bioRxiv [Preprint] 2023; doi: 10.1101/2023.12.05.570156. Update in: Commun Biol 2024; doi: 10.1038/s42003-024-06886-z.
 
  1. Gjorgjieva T, Chaloemtoem A, Shahin T, Bayaraa O, Dieng MM, Alshaikh M, Abdalbaqi M, Del Monte J, Begum G, Leonor C, Manikandan V, Drou N, Arshad M, Arnoux M, Kumar N, Jabari A, Abdulle A, ElGhazali G, Ali R, Shaheen SY, Abdalla J, Piano F, Gunsalus KC, Daggag H, Al Nahdi H, Abuzeid H, Idaghdour Y. Systems genetics identifies miRNA-mediated regulation of host response in COVID-19. Hum Genomics 2023; doi: 10.1186/s40246-023-00494-4.
 
  1. Mahmood SR, Said NHE, Gunsalus KC, Percipalle P. β-actin mediated H3K27ac changes demonstrate the link between compartment switching and enhancer-dependent transcriptional regulation. Genome Biol 2023; doi: 10.1186/s13059-023-02853-9.

2022

  1. Gan HH, Zinno J, Piano F, Gunsalus KC. Omicron Spike Protein Has a Positive Electrostatic Surface That Promotes ACE2 Recognition and Antibody Escape. Frontiers in Virology 2022; doi: 10.3389/fviro.2022.894531.
 
  1. Marnik EA, Almeida MV, Cipriani PG, Chung G, Caspani E, Karaulanov E, Gan HH, Zinno J, Isolehto IJ, Kielisch F, Butter F, Sharp CS, Flanagan RM, Bonnet FX, Piano F, Ketting RF, Gunsalus KC, Updike DL. The Caenorhabditis elegans TDRD5/7-like protein, LOTR-1, interacts with the helicase ZNFX-1 to balance epigenetic signals in the germline. PLOS Genetics 2022; doi: 10.1371/journal.pgen.1010245.

2021

  1. Esposito G, Hunashal Y, Percipalle M, Venit T, Dieng MM, Fogolari F, Hassanzadeh G, Piano F, Gunsalus KC, Idaghdour Y, Percipalle P. NMR-Based Analysis of Nanobodies to SARS-CoV-2 Nsp9 Reveals a Possible Antiviral Strategy Against COVID-19. Advanced Biology 2021; doi: 10.1002/adbi.202101113.
 
  1. Mahmood SR, Xie X, El Said NH, Venit T, Gunsalus KC, Percipalle P. β-actin dependent chromatin remodeling mediates compartment level changes in 3D genome architecture. Nature Communications 2021; doi: 10.1038/s41467-021-25596-2.
 
  1. Cipriani PG, Bay O, Zinno J, Gutwein M, Gan HH, Mayya VK, Chung G, Chen JX, Fahs H, Guan Y, Duchaine TF, Selbach M, Piano F, Gunsalus KC. Novel LOTUS-domain proteins are organizational hubs that recruit elegans Vasa to germ granules. Elife 2021; doi: 10.7554/eLife.60833.
 
  1. Galanti L, Shasha D, Gunsalus KC. Pheniqs 2.0: accurate, high-performance Bayesian decoding and confidence estimation for combinatorial barcode indexing. BMC Bioinformatics 2021; doi: 10.1186/s12859-021-04267-5.
 
  1. Murade CU, Chaudhuri S, Nabti I, Fahs H, Refai FSM, Xie X, Pearson YE, Gunsalus KC, Shubeita GT. FRET-Based Probe for High-Throughput DNA Intercalator Drug Discovery and In Vivo ACS Sens 2021; doi: 10.1021/acssensors.1c00167.
 
  1. Gan HH, Twaddle A, Marchand B, Gunsalus KC. Structural Modeling of the SARS-CoV-2 Spike/Human ACE2 Complex Interface can Identify High-Affinity Variants Associated with Increased Transmissibility. J Mol Biol 2021; doi: 10.1016/j.jmb.2021.167051.
 
  1. Khoury E, Abou Fayad A, Karam Sarkis D, Fahs H, Gunsalus KC, Kallassy Awad M. The Microbiome of the Lebanese Wild Apple, Malus trilobata, is a Rich Source of Potential Biocontrol Agents for Fungal Post-harvest Pathogens of Apples. Curr Microbiol 2021; doi: 10.1007/s00284-021-02397-w.

2020

  1. Xie X, Gjorgjieva T, Attieh Z, Dieng M, Arnoux M, Khair M, Moussa Y, Al Jallaf F, Rahiman N, Jackson C, Messery LE, Pamplona K, Victoria Z, Zafar M, Ali R, Piano F, Gunsalus KC*, and Idaghdour Y*. Microfluidic Nano-Scale qPCR Enables Ultra-Sensitive and Quantitative Detection of SARS-CoV-2. Processes 2020, 8:1425; doi: 10.3390/pr8111425. (* co-corresponding authors)
 
  1. Shibl AA, Isaac A, Ochsenkühn MA, Cárdenas A, Fei C, Behringer G, Arnoux M, Drou N, Santos MP, Gunsalus KC, Voolstra CR, Amin SA. Diatom modulation of select bacteria through use of two unique secondary metabolites. Proc Natl Acad Sci U S A 2020, 117:27445-27455. doi: 10.1073/pnas.2012088117
 
  1. Gjorgjieva T, Xie X, Commins P, Pasricha R, Mahmood SR, Gunsalus KC, Naumov P, Percipalle P. Loss of β-Actin Leads to Accelerated Mineralization and Dysregulation of Osteoblast-Differentiation Genes during Osteogenic Reprogramming. Adv Sci 2020, 7:2002261; doi: 10.1002/advs.202002261.
 
  1. Yousif A, Drou N, Rowe J, Khalfan M, Gunsalus KC. NASQAR: a web-based platform for high-throughput sequencing data analysis and visualization. BMC Bioinf 2020, 21:267; doi: 10.1186/s12859-020-03577

2019

  1. Sofela S, Sahloul S, Stubbs C, Orozaliev A, Refai FS, Esmaeel AM, Fahs H, Abdelgawad MO, Gunsalus KC, Song YA. Phenotyping of the thrashing forces exerted by partially immobilized elegans using elastomeric micropillar arrays. Lab Chip 2019; doi: 10.1039/c9lc00660e.
 
  1. Solntsev KM, Schramm S, Kremb S, Gunsalus KC, Amin SA. Isolation of biologically active compounds from mangrove sediments. Bioanalyt. Chem. 2019; doi: 10.1007/s00216-019-02001-y.
 
  1. Chahal J, Gebert LFR, Gan HH, Camacho E, Gunsalus KC, MacRae IJ, Sagan SM. miR-122 and Ago interactions with the HCV genome alter the structure of the viral 5′ terminus. Nucleic Acids Res. 2019; doi: 10.1093/nar/gkz194.
 
  1. Bezler A, Braukmann F, West SM, Duplan A, Conconi R, Schütz F, Gönczy P, Piano F, Gunsalus K, Miska EA, Keller L. Tissue- and sex-specific small RNAomes reveal sex differences in response to the environment. PLoS Genetics 2019; doi: 10.1371/journal.pgen.1007905.
 
  1. Beltran T, Barroso C, Birkle TY, Stevens L, Schwartz HT, Sternberg PW, Fradin H, Gunsalus K, Piano F, Sharma G, Cerrato C, Ahringer J, Martínez-Pérez E, Blaxter M, Sarkies P. Comparative Epigenomics Reveals that RNA Polymerase II Pausing and Chromatin Domain Organization Control Nematode piRNA Biogenesis. Developmental Cell 2019; doi: 10.1016/j.devcel.2018.12.026.

2018

  1. West SM, Mecenas D, Gutwein M, Aristizabal-Corrales D, Piano F, Gunsalus KC. Developmental dynamics of gene expression and alternative polyadenylation in the Caenorhabditis elegans Genome Biology 2018; doi: 10.1186/s13059-017-1369-x.
 
  1. Xie X, Almuzzaini B, Drou N, Kremb S, Yousif A, Farrants AO, Gunsalus KC, Percipalle P. β-Actin-dependent global chromatin organization and gene expression programs control cellular identity. FASEB Journal 2018; doi: 10.1096/fj.201700753R.

2017

  1. Fradin H, Kiontke K, Zegar C, Gutwein M, Lucas J, Kovtun M, Corcoran DL, Baugh LR, Fitch DHA, Piano F, Gunsalus KC. Genome Architecture and Evolution of a Unichromosomal Asexual Nematode. Current Biology 2017; doi: 10.1016/j.cub.2017.08.038.
 
  1. Nelson DR, Khraiwesh B, Fu W, Alseekh S, Jaiswal AK, Chaiboonchoe A, Hazzouri KM, O’Connor MJ, Butterfoss GL, Drou N, Rowe JD, Harb J, Fernie AR, Gunsalus KC, Salehi-Ashtiani K. The genome and phenome of the green alga Chloroidium sp. UTEX 3007 reveal adaptive traits for desert acclimatization. Elife 2017; pii: e25783. doi: 10.7554/eLife.25783.
 
  1. Flamand MN, Gan HH, Mayya VK, Gunsalus KC, Duchaine TF. A non-canonical site reveals the cooperative mechanisms of microRNA-mediated silencing. Nucleic Acids Research 2017; 45:7212-25. doi: 10.1093/nar/gkx340.
 
  1. Benyettou F, Fahs H, Elkharrag R, Bilbeisi RA, Asma B, Rezgui R, Motte L, Magzoub M, Brandel J, Olsen J-C, Piano F, Gunsalus KC, Platas-Iglesias C, Trabolsi A. Selective growth inhibition of cancer cells with doxorubicin-loaded CB[7]-modified iron-oxide nanoparticles. RSC Advances 2017; 7, 23827. doi: 10.1039/C7RA02693E.

2016

  1. Weicksel SE, Mahadav A, Moyle M, Cipriani PG, Kudron M, Pincus Z, Bahmanyar S, Abriola L, Merkel J, Gutwein M, Fernandez AG, Piano F, Gunsalus KC, Reinke V. A novel small molecule that disrupts a key event during the oocyte-to-embryo transition in elegans. Development 2016; 143(19):3540-3548. doi: 10.1242/dev.140046.
 
  1. Desta IT, Al-Sharif A, AlGharibeh N, Mustafa N, Orozaliev A, Giakoumidis N, Gunsalus KC, Song Ya. Detecting and Trapping of a Single elegans Worm in a Microfluidic Chip for Automated Microplate Dispensing. J Lab Automation 2016; doi: 10.1177/2211068216669688.
 
  1. Chen JX, Cipriani PG, Mecenas D, Polanowska J, Piano F, Gunsalus KC, Selbach M. In Vivo Interaction Proteomics in Caenorhabditis elegans Embryos Provides New Insights into P Granule Dynamics. Mol Cell Proteomics 2016; 15(5):1642-57. doi: 10.1074/mcp.M115.053975.

2015

  1. Gan HH & Gunsalus KC. Assembly and analysis of eukaryotic Argonaute-RNA complexes in microRNA-target recognition. Nucleic Acids Res 2015;43:9613-25. doi: 10.1093/nar/gkv990. PMCID: PMC4787751.
 
  1. Paaby AB, White AG, Riccardi DD, Gunsalus KC, Piano F and Rockman MV. Wild worm embryogenesis harbors ubiquitous polygenic modifier variation. eLife 2015; doi: 10.7554/eLife.09178. PMCID: PMC4569889.

2014

  1. Cicconet M, Gutwein M, Gunsalus KC, and Geiger D. Label Free Cell-Tracking and Division Detection Based on 2D Time-Lapse Images For Lineage Analysis of Early Embryo Development. Computers in Biology and Medicine 2014, 51: 24-34.

2013

  1. White A, Lees B, Kao H-L, Cipriani G, Munarriz E, Paaby AL, Erickson K, Guzman S, Rattanakorn K, Sontag E, Geiger D, Gunsalus KC, Piano F. DevStaR: high-throughput quantification of developmental stages. IEEE Transactions on Biomedical Imaging IEEE Trans Med Imaging 2013; 32(10):1791-803.
 
  1. Gan HH & Gunsalus KC. Tertiary structure-based analysis of microRNA-target interactions. RNA 2013;19:539-51.

2012

  1. Mizrak D, Ruben M, Myers GN, Rhrissorrakrai K, Gunsalus KC, Blau J. Electrical Activity Can Impose Time of Day on the Circadian Transcriptome of Pacemaker Neurons. Curr Biol 2012; 22:1-10.

2011

  1. Rhrissorrakrai K, Gunsalus KC. MINE: a tool to identify Modules In Networks. BMC Bioinf 2011; 12:192.
 
  1. Poultney CS, Butterfoss GL, Gutwein MR, Drew K, Gresham D, Gunsalus KC, Shasha D, Bonneau R. Rational Design of Temperature-Sensitive Alleles Using Computational Structure Prediction. PLoS ONE 2011; 6:e23947. doi:10.1371/journal.pone.0023947
 
  1. Green R, Kao H-L, Audhya A, Arur S, Schulman M, Schloissnig S, Niessen S, Laband K, Wang S, Hyman A, Desai A, Schedl T, Piano F, Gunsalus KC*, Oegema K*. High-Resolution Phenotypic Profiling Based on the Complex Architecture of the elegans Gonad Syncytium. Cell 2011; 145 :470-82. (*Corresponding authors) (selected for video abstract)

2010

  1. Gerstein M…(115 other authors)… Strome S*, Gunsalus KC*, Micklem G*, Liu XS*, Reinke V*, Kim SK*, Hillier LW*, Henikoff S*, Piano F*, Snyder M*, Stein L*, Lieb JD*, Waterston RH*. Integrative Analysis of Functional Elements in the Caenorhabditis elegans Genome by the modENCODE Project. Science 2010; 330:1775-87. (*corresponding authors)
 
  1. Mangone M, Manoharan AP, Thierry-Mieg D, Thierry-Mieg J, Han T, Mackowiak S, Mis E, Zegar C, Gutwein MR, Khivansara V, Attie O, Chen K, Salehi-Ashtiani K, Vidal M, Harkins TT, Bouffard P, Suzuki Y, Sugano S, Kohara Y, Rajewsky N, Piano F*, Gunsalus KC*, Kim JK*. The landscape of elegans 3’UTRs. Science 2010; 329:432-5. (*Corresponding authors)
 
  1. Dreij K, Rhrissorrakrai K, Gunsalus KC, Geacintov NE, Scicchitano DA. Benzo[a]pyrene diol epoxide stimulates an inflammatory response in normal human lung fibroblasts through a p53 and JNK mediated pathway. Carcinogenesis 2010; 31:1149-57.

2009

  1. Celniker SE, Dillon LA, Gerstein MB, Gunsalus KC, Henikoff S, Karpen GH, Kellis M, Lai EC, Lieb JD, MacAlpine DM, Micklem G, Piano F, Snyder M, Stein L, White KP, Waterston RH; modENCODE Consortium. Unlocking the secrets of the genome. Nature 2009; 459:927-30.
 
  1. Simonis N, Rual JF, Carvunis AR, Tasan M, Lemmens I, Hirozane-Kishikawa T, Hao T, Sahalie JM, Venkatesan K, Gebreab F, Cevik S, Klitgord N, Fan C, Braun P, Li N, Ayivi-Guedehoussou N, Dann E, Bertin N, Szeto D, Dricot A, Yildirim MA, Lin C, de Smet AS, Kao HL, Simon C, Smolyar A, Ahn JS, Tewari M, Boxem M, Milstein S, Yu H, Dreze M, Vandenhaute J, Gunsalus KC, Cusick ME, Hill DE, Tavernier J, Roth FP, Vidal M. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Nature Methods 2009; 6:47-54.

2008

  1. Kapelnikov A, Zelinger E, Gottlieb Y, Rhrissorrakrai K, Gunsalus KC, Heifetz Y. Mating induces an immune response and developmental switch in the Drosophila Proc Natl Acad Sci USA 2008; 105:13912-7.
 
  1. Boxem M, Maliga Z, Klitgord N, Li N, Lemmens I, Mana M, de Lichtervelde L, Mul JD, van de Peut D, Devos M, Simonis N, Yildirim MA, Cokol M, Kao HL, de Smet AS, Wang H, Schlaitz AL, Hao T, Milstein S, Fan C, Tipsword M, Drew K, Galli M, Rhrissorrakrai K, Drechsel D, Koller D, Roth FP, Iakoucheva LM, Dunker AK, Bonneau R, Gunsalus KC, Hill DE, Piano F, Tavernier J, van den Heuvel S, Hyman AA, Vidal M. A protein domain-based interactome network for elegans early embryogenesis. Cell 2008; 134:534-45.
 
  1. Structural Genomics Consortium; China Structural Genomics Consortium; Northeast Structural Genomics Consortium (83 authors … Gunsalus KC). Protein production and purification. Nature Methods 2008 5:135-46.
 
  1. Mangone M, MacMenamin P, Zegar C, Piano F, Gunsalus KC. UTRome.org: a platform for 3’UTR biology in elegans. Nucl Acids Res (Database issue 2008) 36:D57-62.

2007

  1. Velarde N, Gunsalus KC, Piano F. Actin roles in elegans early embryogenesis. BMC Dev Biol 2007 7:142.
 
  1. Pujana MA, Han J-DJ, Starita LM, Stevens KN, Tewari M, Ahn JS, Rennert G, Moreno V, Kirchhoff T, Gold B, Assmann V, ElShamy WM, Rual J-F, Levine D, Rozek LS, Gelman RS, Gunsalus KC, Greenberg RA, Sobhian B, Bertin N, Venkatesan K, Ayivi-Guedehoussou N, Solé X, Hernández P, Lázaro C, Nathanson KL, Weber BL, Cusick ME, Hill DE, Offit K, Livingston DM, Gruber SB, Parvin JD & Vidal M. Network modeling links breast cancer susceptibility and centrosome dysfunction. Nature Genetics 2007; 39:1338-49.
 
  1. Min J, Kyung Kim Y, Cipriani PG, Kang M, Khersonsky SM, Walsh DP, Lee JY, Niessen S, Yates JR 3rd, Gunsalus K, Piano F, Chang YT. Forward chemical genetic approach identifies new role for GAPDH in insulin signaling. Nat Chem Biol 2007; 3:55-9.

2006

  1. Blair A, Tomlinson A, Pham H, Gunsalus KC, Goldberg ML, Laski FA. Twinstar, the Drosophila homologue of Cofilin/ADF, is required for planar cell polarity patterning. Development 2006 133:1789-97.
 
  1. Lall S, Grun D, Krek A, Chen K, Wang YL, Dewey CN, Sood P, Colombo T, Bray N, MacMenamin P, Kao HL, Gunsalus KC, Pachter L, Piano F, Rajewsky N. A Genome-Wide Map of Conserved MicroRNA Targets in elegans. Current Biology 2006; 16: 460-71. (Most downloaded article and Featured Article online for March 7, 2006 issue)

2005

  1. Gunsalus KC*, Ge H*, Schetter A*, Goldberg DS*, Han JD, Hao T, Berriz GF, Bertin N, Huang J, Chuang LS, Li N, Mani R, Hyman AA, Sönnichsen B, Echeverri CJ, Roth FP, Vidal M, Piano F. Predictive models of molecular machines involved in early elegans embryogenesis. Nature 2005; 436:861-865. [*Co-1st authors] (Featured online at NSF.gov, NPR radio series “Imagine That”, and radio interview for WPUR, Boston; highlighted in Developmental Cell; selected as “Must Read” by Faculty of 1000 Biology)
 
  1. Grün D, Wang Y-L, Langenberger D, Gunsalus KC, Rajewsky N. microRNA target predictions across seven Drosophila species and comparison to mammalian targets. PLoS Comput Biol 2005; 1(1):e13.
 
  1. Sönnichsen B, Koski L, Walsh A, Marshall P, Neumann F, Brehm M, Alleaume A-M, Artelt J, Bettencourt P, Cassin E, Hewitson M, Holz C, Khan M, Lazik S, Martin C, Nitzsche B, Ruer M, Stamford J, Winzi M, Heinkel R, Röder M, Finell J, Häntsch H, Jones S, Jones M, Piano F, Gunsalus KC, Oegema K, Gönczy P, Coulson A, Hyman AA, Echeverri CJ. Full-genome RNAi profiling of early embryogenesis in Caenorhabditis elegans. Nature 2005; 434:462-469. (“Must Read” selection by Faculty of 1000 Biology)
 
  1. Krek A, Grün D, Poy MN, Wolf R, Rosenberg L, Epstein EJ, MacMenamin P, da Piedade I, Gunsalus KC, Stoffel M, Rajewsky N. Combinatorial microRNA target predictions. Nat Genet 2005; 37:495-500. (highlighted on issue cover; “Recommended” selection by Faculty of 1000 Biology)
 
  1. Maciejowski J, Ahn JH, Cipriani PG, Killian DJ, Chaudhary AL, Lee JI, Voutev R, Johnsen RC, Baillie DL, Gunsalus KC, Fitch DHA, Hubbard EJA. Autosomal genes of autosomal/X-linked duplicated gene pairs and germline proliferation in elegans. Genetics 2005; 169:1997-2011.
 
  1. Fernandez AG*, Gunsalus KC*, Huang J, Chuang LS, Ying N, Liang H-L, Tang CT, Schetter A, Zegar C, Rual J, Hill DE, Reinke V, Vidal M, and Piano F. Novel gene function in elegans embryogenesis revealed using RNAi of ovary-enriched ORFeome clones. Genome Res 2005; 15:250-259. [*Co-first authors] (cover artwork for the issue)

2004

  1. Li S, Armstrong CM, Bertin N, Ge H, Milstein S, Boxem M, Vidalain PO, Han JD, Chesneau A, Hao T, Goldberg DS, Li N, Martinez M, Rual JF, Lamesch P, Xu L, Tewari M, Wong SL, Zhang LV, Berriz GF, Jacotot L, Vaglio P, Reboul J, Hirozane-Kishikawa T, Li Q, Gabel HW, Elewa A, Baumgartner B, Rose DJ, Yu H, Bosak S, Sequerra R, Fraser A, Mango SE, Saxton WM, Strome S, Van Den Heuvel S, Piano F, Vandenhaute J, Sardet C, Gerstein M, Doucette-Stamm L, Gunsalus KC, Harper JW, Cusick ME, Roth FP, Hill DE, Vidal M. A map of the interactome network of the metazoan elegans. Science 2004; 303:540-3. (“Recommended” selection by Faculty of 1000 Biology)
 
  1. Gunsalus KC, Yueh WC, MacMenamin P, Piano F. RNAiDB and PhenoBlast: web tools for genome-wide phenotypic mapping projects. Nucleic Acids Res 2004; 32:D406-10.
 
  1. Verni F, Somma MP, Gunsalus KC, Bonaccorsi S, Belloni G, Goldberg ML, and Gatti M. Feo, the Drosophila homologue of PRC1, is required for central spindle formation and cytokinesis. Curr Biol 2004; 14:1569-75.
 
  1. Monleon D, Chiang Y, Aramini JM, Swapna GV, Macapagal D, Gunsalus KC, Kim S, Szyperski T, Montelione GT. Backbone 1H, 15N and 13C assignments for the 21 kDa Caenorhabditis elegans homologue of “brain-specific” protein. J Biomolec NMR 2004; 28: 91-2.

2002

  1. Piano F, Schetter A, Morton D, Gunsalus KC, Reinke V, Kim SK, Kemphues KJ. Gene clustering based on 47 embryonic phenotypes derived from RNAi analysis of 751 ovary-enriched genes in elegans. Current Biology 2002; 12: 1959-1964.
 
  1. Walhout AJM, Reboul J, Shtanko O, Bertin N, Vaglio P, Ge H, Lee H, Doucette-Stamm L, Schetter AJ, Morton DG, Gunsalus KC, Kemphues KJ, Reinke V, Kim SK, Piano F, Vidal M. Integration of interactome, phenome and transcriptome maps of the elegans germline. Curr Biol 2002; 12: 1952-1959. (“Recommended” selection by Faculty of 1000 Biology)

2001

  1. Chen J, Godt D, Gunsalus K, Kiss I, Goldberg M, and Laski FA. Cofilin/ADF is required for cell motility during Drosophila ovary development and oogenesis. Nat Cell Biol 2001; 3:204-9.

2000

  1. Montelione GT, Zheng D, Huang YJ, Gunsalus KC, and Szyperski T. Protein NMR spectroscopy in structural genomics. Nat Struct Biol 2000; 7 Suppl:982-5.
 
  1. Tomancak P, Piano F, Riechmann V, Gunsalus KC, Kemphues KJ, and Ephrussi A. A Drosophila melanogaster homologue of Caenorhabditis elegans par-1 acts at an early step in embryonic-axis formation. Nat Cell Biol 2000; 2:458-60.

1995

  1. Gunsalus KC, Bonaccorsi S, Williams E, Verni F, Gatti M, and Goldberg ML. Mutations in twinstar, a Drosophila gene encoding a cofilin/ADF homologue, result in defects in centrosome migration and cytokinesis. J Cell Biol 1995; 131:1243-59.

Reviews and Book or Series Chapters

  1. Gan HH and Gunsalus KC. The role of tertiary structure in microRNA target recognition. In microRNA Target Identification, Methods in Molecular Biology Series. Ed. Alessandro Laganà 2019; Springer pp. 43-64.

  2. Gunsalus KC and Rhrissorrakrai K. Networks in elegans. Curr Opin Genet Devel 2011;21:787-98.

  3. Fernandez A, Gunsalus KC, Piano F. Toward a systems view of development in elegans early embryogenesis. In Systems Biology, Annual Plant Reviews, Blackwell Publishing. Edds. G.M. Coruzzi & R.A. Gutierrez 2009; pp. 137-165.

  4. Kao HL and Gunsalus KC. Browsing multidimensional molecular networks with the generic network browser (N-Browse). Curr Protoc Bioinf 2008; Chapter 9:Unit 9.11.

  5. Gunsalus KC. A Caenorhabditis elegans genetic interaction map wiggles into view. J Biol 2008; 7:8.

  6. Piano F, Gunsalus KC, Hill DA, Vidal M. elegans network biology: a beginning. WormBook, ed. The C. elegans Research Community, WormBook, doi/10.1895/wormbook.1.7.1, http://www.wormbook.org. (August 21, 2006)

  7. Acton T, Gunsalus KC, Xiao R, Ma LC, Aramini J, Baron MC, Chiang Y-W, Climent T, Cooper B, Denissova N, Douglas SM, Everett JK, Palacios D, Paranji RK, Shastry R, Wu M, Ho CK, Shih L-Y, Swapna GVT, Wilson M, Gerstein M, Inouye M, Hunt JF, Montelione GT. Robotic cloning and protein production platform of the Northeast Structural Genomics Consortium. Methods Enzymol 2005; 394:210-243.

  8. Gunsalus KC and Piano F. RNAi as a tool to study cell biology: building the genome-phenome bridge. Curr Opin Cell Biol 2005; 17:3-8.

  9. Piano F and Gunsalus KC. RNAi-based functional genomics in elegans. Curr Genomics 2002; 3:69-81.

  10. Montelione GT, Zheng D, Huang YJ, Gunsalus KC, Szyperski T. Protein NMR spectroscopy in structural genomics. Nat Struct Biol 2000; 7 Suppl: 982-5.

  11. Goldberg, ML, Gunsalus KC, Karess R, and Chang F. New Insights into Cytokinesis.  In Mechanisms of Cell Division: Frontiers in Molecular Biology.  S. Endow & D. Glover 1998; pp. 270-317. OUP, Oxford.

  12. Giansanti MG, Bonaccorsi S, Williams BC, Gunsalus KC, and Goldberg ML. Genes controlling cytokinesis during meiosis in Drosophila melanogaster  In Proceedings on Chromosome Segregation and Aneuploidy (April 24-29, 1995, Sorrento, Italy). Eds. A. Abbondandolo, BK Vig, R Roi 1995; pp. 304-316.